I've had yourkit lock up on me when trying to take a snapshot. This has happened several times ... typically when the process I am profiling has had several out of memory errors due to a leak that I am trying to track down. Once yourkit locks up, both the yourkit process and the process I am trying to analyze become non-responsive and I have to kill them both.
yourkit freezes with 1% on the capturing snapshot dialog.
Using windows XP
Using the sun jdk 1.4.2_5 (that comes with weblogic 8.1.4) for the process I am trying to analyze.
YourKit 4.0 EAP build 502
yourkit locks up when taking a snapshot
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